Using a custom Agilent Canine Genome CGH Microarray 180 K
Purified DNA 500 ng of processed as a control.
DNAs were double digested with RsaI and AluI for 2 hours at 37 °C, then incubated at 65 °C, for 20 minutes.
Labeling was performed for 2 hours using Cy5-dUTP for the subject DNA and Cy3-dUTP.
Pre-annealing with 5 ml of Cot-1 DNA at 65°C with rotation for 40 hours
Two washing steps
CGH analytics software