The understanding of calcium as a second messenger in plants has been growing intensively over the lastdecades. Recently, attention has been drawn to the organelles, especially the chloroplast but focused on thestromal Ca2+ transients in response to environmental stresses. Herein we will expand this view and discussthe role of Ca2+ in photosynthesis. Moreover we address of how Ca2+ is delivered to chloroplast stroma and thylakoids. Thereby, new light is shed on the regulation of photosynthetic electron flow and light-dependent metabolism by the interplay of Ca2+, thylakoid acidification and redox status. This article is part of a Special Issue entitled: Chloroplast biogenesis.