Stocking of ponds with planktivorous carps in polyculture with channel catfish (Ictalurus punctatus and a hybrid) reduced the density of zooplankton when compared to controls. Bighead (Aristichthys nobilis) and silver carp (Hypophthalmichthys molitrix) similarly reduced zooplankton, though the mechanism of suppression may be different. Phytoplankton biomass was significantly higher in ponds containing bighead and silver carp. Ammonia and nitrite concentrations were similar in bighead and silver carp ponds and were significantly lower than in control ponds.