GenBank accession numbers [41] are given for the human and rodent sequences. The transcription-factor-binding sequences refer to the human or rodent sequence(s) marked with an asterisk. ‘Location’ refers to the position of the TFBS relative to the transcription start site.
experimentally annotated binding sites are located within gene pairs (data not shown). Ratios of the sensitivity results conserved regions, as we can correctly detect 82.5% of the obtained using single-sequence analysis to those obtained TFBSs with a score threshold of 60%, using orthologous using phylogenetic footprinting, are shown in Figure 2c.