A native VLAN is assigned to an 802.1Q trunk port. Trunk ports are the links between switches that support the transmission of traffic associated with more than one VLAN. An 802.1Q trunk port supports traffic coming from many VLANs (tagged traffic), as well as traffic that does not come from a VLAN (untagged traffic). The 802.1Q trunk port places untagged traffic on the native VLAN, which by default is VLAN 1.
Native VLANs are defined in the IEEE 802.1Q specification to maintain backward compatibility with untagged traffic common to legacy LAN scenarios. A native VLAN serves as a common identifier on opposite ends of a trunk link.
It is a best practice to configure the native VLAN as an unused VLAN, distinct from VLAN 1 and other VLANs. In fact, it is not unusual to dedicate a fixed VLAN to serve the role of the native VLAN for all trunk ports in the switched domain.