Tony Almeida and a co-conspirator named Cara Bowden force an innocent Muslim man to deliver the canister to a subway. Jack intercepts the canister just in time but surrenders himself to Tony when he learns that Bowden's operatives are following Kim. Tony convinces Cara and the leader of their group named Alan Wilson to harvest the pathogen from Jack's body. Tony tells Jack in private that his plan is really to bring Alan Wilson into the open so that he can be murdered; Alan Wilson was the man behind Charles Logan, who had Michelle Dessler killed. FBI agents arrive at the compound having learned of Jack's location from a rescued Kim Bauer. A firefight ensues which is ended by Jack and Renee who stop Almeida from killing Wilson. Renee decides to torture Wilson when she learns that he has covered all his tracks. After Jack's doctor induces a coma, Kim arrives and begs her to begin the stem cell procedure that Jack told her not to undergo. The season ends with Kim at her father's side, left with a thread of hope that he may survive.